scientific-arrayexpress-expression
CommunitySearch and reanalyze ArrayExpress data.
Authornahisaho
Version1.0.0
Installs0
System Documentation
ArrayExpress 発現アーカイブスキル。BioStudies/ArrayExpress REST API を活用した発現データ検索・メタデータ取得・再解析パイプラインを提供する。
What problem does it solve?
Large-scale expression datasets across ArrayExpress and BioStudies are scattered and difficult to compare; this skill centralizes discovery, metadata extraction, and cross-study reanalysis steps to streamline data-driven research.
Core Features & Use Cases
- Search expression experiments across ArrayExpress and BioStudies and retrieve metadata.
- Retrieve SDRF sample information and associated files for downstream analyses.
- Perform cross-study reanalysis by assembling expression matrices and metadata for comparative studies.
Quick Start
Invoke the arrayexpress-expression pipeline with your search query to retrieve experiments and download metadata for downstream reanalysis.
Dependency Matrix
Required Modules
None requiredComponents
Standard package💻 Claude Code Installation
Recommended: Let Claude install automatically. Simply copy and paste the text below to Claude Code.
Please help me install this Skill: Name: scientific-arrayexpress-expression Download link: https://github.com/nahisaho/satori/archive/main.zip#scientific-arrayexpress-expression Please download this .zip file, extract it, and install it in the .claude/skills/ directory.
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