vdjdb-db

Run `npx skills add antigenomics/vdjdb-db --all -g -y` in your terminal to install all curation skills globally.

VDJdb is a curated database of T-cell receptor sequences with known antigen specificity, used by immunology researchers to study how T cells recognize epitopes in specific MHC contexts.

The skills guide you through extracting records from source files, formatting them to the VDJdb specification, proofreading for errors, and publishing each chunk with a linked GitHub issue.

Yes. It validates V/D/J gene names against IMGT references and HLA alleles against official allele tables, then converts outdated or non-standard names automatically.

Basic familiarity with TCR data helps, but the skills handle the technical validation, naming rules, and quality checks based on your plain-English instructions.